PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B62EN
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 156aa    MW: 17869.4 Da    PI: 6.5076
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B62ENgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.4e-10948340
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqc 40
                     +W++ Ed ll d+v+++G g+W+tIa+  +   +Rt+kq+
      Aradu.B62EN  9 AWSEKEDNLLRDVVQRFGEGHWATIAKGGNfsVKRTAKQI 48
                     7***************************999999****98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.84260IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.9E-11355IPR009057Homeodomain-like
SuperFamilySSF466899.33E-9550IPR009057Homeodomain-like
SMARTSM007171.9E-4658IPR001005SANT/Myb domain
PfamPF002491.0E-8950IPR001005SANT/Myb domain
CDDcd116607.34E-91048No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MTSKKRKIAW SEKEDNLLRD VVQRFGEGHW ATIAKGGNFS VKRTAKQIDQ YASECLIQCK  60
ATCMCRRNML LEVAMVARML MWEDEFCQGR SASLVEDMDG GGEDPVRKTF SKMSIQLYNY  120
GEGWLPPEWT DQFDFGIQTI DVIQAGHGLI NYRNSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.22e-07MYB_related family protein